Overview over the menu
File
Snapshot Takes a
snapshot of the molecule or
crystal
picture. It can be saved to
disk or sent to the printer.
Print
Prints a snapshot of nthe molecule or
crystal
picture
View
Display
Bond width Allows to
choose the thickness of the
representation of bonds
Thin
Middle
Thick
Light Allows to determine the directions
from which the molecule is lighted
Front
Back
Upper
Lower
Background Determines the color of the
background
White
Black
Sphere resolution Determines the approximation
quality of spheres
Coarse (10-cornered)
Middle (20-cornered)
Fine (30-cornered)
Representation Determines the kind of representation
of the molecule or crystal
Wireframe
Sphere (VDW)
Stick
Sphere-and-stick
(CPK)
Color by Determines the kind of coloring
Name Colors are chosen by atom names
Index Colors are chosen by teh index in the
molecule description
Molecule If the picture contains several
molecules they are differently
colored
Select atoms Allows to choose which atom types
should be visible. Clicking an atom
name in the upcoming window toggles
its visibility state (green:
visible; red:
unvisible)
Projection Choose the type of projection
Parallel
Perspective
Labels Chooses whether the atom labels (atom
name + index) should be shown.
Epiped Chooses whether the base epiped
should be shown.
Colors
Color definition Allows to choose the colors for coloring
by atom respectively by molecule.
Atom colors
Molecule colors
Save colors Saves the chosen colors into a file of the
folder <working directory>/.FlexCryst .
In following runs these files will be
used
until they are overwritten
or deleted.
Atom colors
Molecule colors
Picking
None Picking of atoms is impossible
Distance If you pick two atoms one after the other
their distance is printed in the output
window.
Angle If you pick three atoms one after the other
the angle between fisrt, second and third
atom is printed in the output window.
Dihedral If you pick four atoms one after the other
their dihedral angle is printed in the
output
window.